archive-be.com » BE » V » VIB-UGENT.BE

Total: 357

Choose link from "Titles, links and description words view":

Or switch to "Titles and links view".
  • Tools
    to perform these analyses themselves To alleviate this we provide a user interface to bioinformatics tools routineously used in the lab The initial focus is on High Throughput Sequencing analysis As user interface we use Galaxy web based platform that allows you to perform reproduce and share data intensive analyses Cornet Cornet allows integrating plant coexpression protein protein interactions regulatory interactions gene associations and functional annotations both in Arabidopsis and maize Plaza PLAZA is an access point for plant comparative genomics centralizing genomic data produced by different genome sequencing initiatives It integrates plant sequence data and comparative genomics methods and provides an online platform to perform evolutionary analyses and data mining within the green plant lineage Viridiplantae Plaza has been developed by the group of Klaas Vandepoele Next Projects Group Members Lab Members and Alumni Tools Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab Daniel Van Damme Lab Dirk Inzé Lab Frank Van Breusegem Lab Geert De Jaeger Lab Ive De Smet Lab Jenny Russinova Lab Lieven De Veylder Lab Mieke Van Lijsebettens Lab Moritz Nowack Lab Sofie Goormachtig Lab Steven Maere Lab Tom Beeckman Lab Yves Van de Peer Lab Wout Boerjan Lab About PSB PSB

    Original URL path: http://www.psb.vib-ugent.be/tools (2016-04-26)
    Open archived version from archive


  • Introduction
    adoption of High Throughput Sequencing HTS methods a different approach to data analysis is now required Before most analyses in Life Sciences could be conducted on a personal PC But the large amounts of data and the requirements of the HTS analysis algorithms call for dedicated servers and an optimized storage solution The Applied Bioinformatics Biostatistics group has been founded with three goals in mind enable wetlab scientists to perform everyday bioinformatic analyses through a user friendly interface provide expertise to tackle custom data and statistical analysis offer consultancy and training This core facility within PSB is also available for industrial collaborations If you have further questions This email address is being protected from spambots You need JavaScript enabled to view it get in touch with us Next Projects Group Members Lab Members and Alumni Tools Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab Daniel Van Damme Lab Dirk Inzé Lab Frank Van Breusegem Lab Geert De Jaeger Lab Ive De Smet Lab Jenny Russinova Lab Lieven De Veylder Lab Mieke Van Lijsebettens Lab Moritz Nowack Lab Sofie Goormachtig Lab Steven Maere Lab Tom Beeckman Lab Yves Van de Peer Lab Wout Boerjan Lab About PSB PSB

    Original URL path: http://www.psb.vib-ugent.be/projects-frcop/384-introduction (2016-04-26)
    Open archived version from archive

  • Bioinformatics
    raw data mapping of the reads to the genome and summarize to a count table By providing a user friendly graphical environment instead of command line usage of our high memory computing cluster which requires in depth knowledge of unix we enable wetlab scientists to perform these analyses themselves For the statistical correct processing of your data we offer solutions through consultancy Next to HTS analysis we also provide a broad expertise in bioinformatics analyses We can offer help in computationally solving systems biology problems such as gene network inference gene set enrichment gene annotation etc Besides this our team is also experienced in using modeling approaches to solve a wide range of biological problems General methodologies typically applied are clustering regression and classification With years of experience we can also provide custom software or scripts to improve and automate your analysis We apply different programming languages tailored to the analysis python java perl R php javascript If you have further questions This email address is being protected from spambots You need JavaScript enabled to view it with us Prev Next Projects Group Members Lab Members and Alumni Tools Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab

    Original URL path: http://www.psb.vib-ugent.be/projects-frcop/385-bioinformatics (2016-04-26)
    Open archived version from archive

  • Biostatistics
    The goal is to enable scientists to perform the statistical analyses of their data To ensure that your experimental setup is adequate to address the research question it is desirable to include the statistical consultant from the beginning of the project He she will verify that the planned set up and size of the study will be adequate In the Applied Bioinformatics and Biostatistics group we provide expertise to optimize your experimental setup for your biological questions as well as help with the analysis We aim to enable scientist to perform the analysis themselves but can also be contacted for custom data analysis projects If you have further questions This email address is being protected from spambots You need JavaScript enabled to view it get in touch with us Prev Projects Group Members Lab Members and Alumni Tools Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab Daniel Van Damme Lab Dirk Inzé Lab Frank Van Breusegem Lab Geert De Jaeger Lab Ive De Smet Lab Jenny Russinova Lab Lieven De Veylder Lab Mieke Van Lijsebettens Lab Moritz Nowack Lab Sofie Goormachtig Lab Steven Maere Lab Tom Beeckman Lab Yves Van de Peer Lab Wout Boerjan Lab About

    Original URL path: http://www.psb.vib-ugent.be/projects-frcop/386-biostatistics (2016-04-26)
    Open archived version from archive

  • PSB
    Home About PSB Research Tech Transfer Education Jobs Contact Intranet Admin Error Category not found About PSB PSB Missions The Department Infrastructure Core Facilities International Projects Publications News Seminars Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab Daniel Van Damme Lab Dirk Inzé Lab Frank Van Breusegem Lab Geert De Jaeger Lab Ive De Smet Lab Jenny Russinova Lab Lieven De Veylder Lab Mieke Van Lijsebettens Lab

    Original URL path: http://www.psb.vib-ugent.be/component/content/?layout=blog&id=88&Itemid=557 (2016-04-26)
    Open archived version from archive

  • Infrastructure
    De Veylder This email address is being protected from spambots You need JavaScript enabled to view it Cell cycle 32 0 9 33 13 961 Read more front PSB Missions The Department Infrastructure Core Facilities International Projects Publications News Seminars About PSB PSB Missions The Department Infrastructure Core Facilities International Projects Publications News Seminars Research Groups Alain Goossens Lab Ann Depicker Lab Bruno Cammue Lab Daniel Van Damme Lab Dirk

    Original URL path: http://www.psb.vib-ugent.be/infrastructure/144-research/livey (2016-04-26)
    Open archived version from archive

  • Programme
    session allowing you to have discussions or meetings with other participants and look at the posters to participate at the Knowledge for Growth conference 105 for half a day including lunch or to visit the Food Pilot at ILVO If you are interested in participating at the Knowledge for Growth please indicate this during your registration so you can pay the extra 105 If you are interested in visiting the

    Original URL path: http://www.psb.vib-ugent.be/ISPMF/index.php/programme (2016-04-26)
    Open archived version from archive

  • Abstract Submission
    Accommodation Contact us Admin Login page Registration Form User s profile ISPMF Search Home Programme Abstract Submission Registration Venue Accommodation Contact us Abstract submission form for poster presentation Poster abstract submission has been closed Abstracts Title Authors Affiliations Abstract References

    Original URL path: http://www.psb.vib-ugent.be/ISPMF/index.php/abstract-submission (2016-04-26)
    Open archived version from archive